A personal peeve of mine for this edition, fishing.
I don't like it in games full stop, it annoys and bores me and it's all the fault of Sonic Adventure on the Dreamcast. You had the cool and fast levels with Sonic and Tails and then every now and then you had to break for the most annoying and frustrating levels with Big the Cat fishing for Froggy which was so pointless to the game.
I love the Legend of Zelda games but cannot stand the fishing sections, if they are optional at least I can leave them, but I'm currently playing Twilight Princess on the Wii and got completely stuck on the fishing section. I admit I just could not seem to grasp it and part of it is due to the fact that it bores me and therefore I just didn't have the patience to master it, my own fault I know but I still hate fishing in games.